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High Fidelity Full-Color Optical Sectioning Structured Illumination Microscopy by Fourier Domain Based Reconstruction
Dang, Shipei1,2; Qian, Jia1; Ma, Wang1,2; Ma, Rui1,2; Li, Xing1,2; Wang, Siying1,2; Bai, Chen1; Dan, Dan1; Yao, Baoli1,2
作者部门瞬态光学研究室
2024-05
发表期刊PHOTONICS
ISSN2304-6732
卷号11期号:5
产权排序1
摘要

The natural color of biological specimens plays a crucial role in body protection, signaling, physiological adaptations, etc. Full-color optical sectioning structured illumination microscopy (OS-SIM) color is a promising approach that can reconstruct biological specimens in three-dimension meanwhile maintaining their natural color. Full-color OS-SIM takes the advantages of rapid imaging speed, compatibility with fluorescence and non-fluorescence samples, compact configuration, and low cost. However, the commonly used HSV-RMS reconstruction algorithm for full-color OS-SIM faces two issues to be improved. One is the RMS (root-mean-square) OS reconstruction algorithm is prone to background noise, and the other is the reconstruction is bound in RGB and HSV color spaces, consuming more reconstructing time. In this paper, we propose a full-color Fourier-OS-SIM method that allows for the OS reconstruction using the high-frequency spectrum of the sample and thus is immune to the low-frequency background noise. The full-color Fourier-OS-SIM directly runs in the RGB color space, providing an easy way to restore the color information. Simulation and experiments with various samples (pollen grains and tiny animals) demonstrate that the full-color Fourier-OS-SIM method is superior to the HSV-RMS method regarding background noise suppression. Moreover, benefiting from the background noise suppression merit, the quantitative morphological height map analysis with the full-color Fourier-OS-SIM method is more accurate. The proposed full-color Fourier-OS-SIM method is expected to find broad applications in biological and industrial fields where the 3D morphology and the color information of objects both need to be recovered.

关键词structured illumination microscopy optical sectioning full-color 3D reconstruction
DOI10.3390/photonics11050405
收录类别SCI
语种英语
WOS记录号WOS:001233232500001
出版者MDPI
引用统计
文献类型期刊论文
条目标识符http://ir.opt.ac.cn/handle/181661/97503
专题瞬态光学研究室
通讯作者Dan, Dan; Yao, Baoli
作者单位1.Chinese Acad Sci, Xian Inst Opt & Precis Mech, State Key Lab Transient Opt & Photon, Xian 710119, Peoples R China
2.Univ Chinese Acad Sci, Beijing 100049, Peoples R China
推荐引用方式
GB/T 7714
Dang, Shipei,Qian, Jia,Ma, Wang,et al. High Fidelity Full-Color Optical Sectioning Structured Illumination Microscopy by Fourier Domain Based Reconstruction[J]. PHOTONICS,2024,11(5).
APA Dang, Shipei.,Qian, Jia.,Ma, Wang.,Ma, Rui.,Li, Xing.,...&Yao, Baoli.(2024).High Fidelity Full-Color Optical Sectioning Structured Illumination Microscopy by Fourier Domain Based Reconstruction.PHOTONICS,11(5).
MLA Dang, Shipei,et al."High Fidelity Full-Color Optical Sectioning Structured Illumination Microscopy by Fourier Domain Based Reconstruction".PHOTONICS 11.5(2024).
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