Rapid full-color Fourier ptychographic microscopy via spatially filtered color transfer | |
Chen, Jiurun1,2,3; Wang, Aiye1,2,3; Pan, An1,2; Zheng, Guoan4; Ma, Caiwen1,2![]() ![]() | |
作者部门 | 光电跟踪与测量技术研究室 |
2022-10-01 | |
发表期刊 | PHOTONICS RESEARCH
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ISSN | 2327-9125 |
卷号 | 10期号:10页码:2410-2421 |
产权排序 | 1 |
摘要 | Full-color imaging is of critical importance in digital pathology for analyzing labeled tissue sections. In our previous cover story [Sci. China: Phys., Mech. Astron. 64, 114211 (2021)], a color transfer approach was implemented on Fourier ptychographic microscopy (FPM) for achieving high-throughput full-color whole slide imaging without mechanical scanning. The approach was able to reduce both acquisition and reconstruction time of FPM by three-fold with negligible trade-off on color accuracy. However, the method cannot properly stain samples with two or more dyes due to the lack of spatial constraints in the color transfer process. It also requires a high computation cost in histogram matching of individual patches. Here we report a modified full-color imaging algorithm for FPM, termed color-transfer filtering FPM (CFFPM). In CFFPM, we replace the original histogram matching process with a combination of block processing and trilateral spatial filtering. The former step reduces the search of the solution space for colorization, and the latter introduces spatial constraints that match the low-resolution measurement. We further adopt an iterative process to refine the results. We show that this method can perform accurate and fast color transfer for various specimens, including those with multiple stains. The statistical results of 26 samples show that the average root mean square error is only 1.26% higher than that of the red-green-blue sequential acquisition method. For some cases, CFFPM outperforms the sequential method because of the coherent artifacts introduced by dust particles. The reported CFFPM strategy provides a turnkey solution for digital pathology via computational optical imaging. (c) 2022 Chinese Laser Press |
DOI | 10.1364/PRJ.473038 |
收录类别 | SCI ; EI |
语种 | 英语 |
WOS记录号 | WOS:000890707300022 |
出版者 | CHINESE LASER PRESS |
EI入藏号 | 20230613565944 |
引用统计 | |
文献类型 | 期刊论文 |
条目标识符 | http://ir.opt.ac.cn/handle/181661/96257 |
专题 | 光电跟踪与测量技术研究室 |
通讯作者 | Pan, An |
作者单位 | 1.Chinese Acad Sci, Xian Inst Opt & Precis Mech, Xian 710119, Peoples R China 2.Univ Chinese Acad Sci, Beijing 100049, Peoples R China 3.CAS Key Lab Space Precis Measurement Technol, Xian 710119, Peoples R China 4.Univ Connecticut, Dept Biomed Engn, Storrs, CT 06269 USA |
推荐引用方式 GB/T 7714 | Chen, Jiurun,Wang, Aiye,Pan, An,et al. Rapid full-color Fourier ptychographic microscopy via spatially filtered color transfer[J]. PHOTONICS RESEARCH,2022,10(10):2410-2421. |
APA | Chen, Jiurun,Wang, Aiye,Pan, An,Zheng, Guoan,Ma, Caiwen,&Yao, Baoli.(2022).Rapid full-color Fourier ptychographic microscopy via spatially filtered color transfer.PHOTONICS RESEARCH,10(10),2410-2421. |
MLA | Chen, Jiurun,et al."Rapid full-color Fourier ptychographic microscopy via spatially filtered color transfer".PHOTONICS RESEARCH 10.10(2022):2410-2421. |
条目包含的文件 | ||||||
文件名称/大小 | 文献类型 | 版本类型 | 开放类型 | 使用许可 | ||
Rapid full-color Fou(2724KB) | 期刊论文 | 出版稿 | 限制开放 | CC BY-NC-SA | 请求全文 |
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